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Detailed Information of the Allele
Allele Name cdc39-1
Gene Name CDC39
Orf YCR093W
Aliases SMD6 , ROS1 , NOT1
Type mutant
Description Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs by deadenylation; basal transcription factor
Links [Entrez-Gene]   [GeneDB]   [Germ Online]   [SGD]   [CYGD]   [BioGRID]
Download [Download All Data of the Allele cdc39-1]


Phenotypic images
Compartment [ Actin ] [DNA damage] [Nucleus] [Mitochondria] [Plasma membrane] [Mitotic Spindle]
Actin
temperature Site 1 Site 2 Site 3 Site 4
26
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32
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Statistic Matrix Information
Temperature 26 32
Bud Size
Cell Percentage 38.79% 3.64% 32.73% 24.85% 67.9% 2.88% 18.93% 10.29%
Cell Count 64 6 54 41 165 7 46 25
Actin Count 117 27 142 113 336 24 165 101


PhenoBlast Detail
The PhenoBlast search contains 865 features belong to cell shape and (or) subcellular compartment.
Total alleles in the database used for comparison = 773.
Detailed information in Help function.
WT : wild-type.
Nid: number of features both significantly increased in query and enlisted mutant.
Ndd : number of features both significantly decreased in query and enlisted mutant.
Nad : Nad = Nid + Ndd
Na : number of features both unchanged in query and enlisted mutant.
All : All = Nad + Na.

RN Allele(s) Na Nid Ndd Nad All Match Details
1 taf11-ts2 329 178 60 238 567 details
2 sec10-2 320 182 52 234 554 details
3 ccl1-ts4 384 171 62 233 617 details
4 sec22-1 366 159 68 227 593 details
5 cdc36-16 353 166 61 227 580 details
6 spc24 4-2 349 159 66 225 574 details
7 sec15-1 340 168 57 225 565 details
8 sec5-24 324 160 64 224 548 details
9 cdc9-1 310 160 62 222 532 details
10 cdc24-H 331 167 53 220 551 details
11 LYS5 330 163 56 219 549 details
12 cdc42-1 390 154 64 218 608 details
13 mps1-1 362 160 57 217 579 details
14 ssc1-2 287 156 59 215 502 details
15 pcf11-2 347 155 59 214 561 details
16 pol1-ts 317 165 49 214 531 details
17 TRP2 305 143 71 214 519 details
18 dbf2-3 370 149 64 213 583 details
19 sec6-4 351 152 61 213 564 details
20 cdc2-2 316 163 50 213 529 details
21 cdc24-4 365 151 59 210 575 details
22 cdc24-11 346 146 64 210 556 details
23 spc105-4 342 135 75 210 552 details
24 pol1-1 340 162 48 210 550 details
25 rse1-1 369 144 65 209 578 details
26 pgi1-2 344 142 67 209 553 details
27 krr1-17 327 149 59 208 535 details
28 rho1-td 363 140 67 207 570 details
29 snu114-40 369 137 69 206 575 details
30 dpb11-1 366 143 62 205 571 details
31 ipl1-2 377 151 53 204 581 details
32 mms21-1 309 156 48 204 513 details
33 sec8-9 366 146 57 203 569 details
34 spc24 10-1 360 140 63 203 563 details
35 mcd1-73 349 143 60 203 552 details
36 cdc11-2 348 143 60 203 551 details
37 cdc35-1 331 138 65 203 534 details
38 ndc1-4 343 144 58 202 545 details
39 myo2-16 316 151 51 202 518 details
40 prp2-1 393 147 54 201 594 details
41 scc4-4 341 142 59 201 542 details
42 prp4-ts 358 142 58 200 558 details
43 vti1-11 355 142 58 200 555 details
44 ubc9-2 331 161 39 200 531 details
45 tap42-11 360 140 59 199 559 details
46 irr1-1 355 124 75 199 554 details
47 sec3-2 348 131 68 199 547 details
48 rfc2-1 316 141 58 199 515 details
49 sup35-td 286 151 48 199 485 details
50 cdc21-1 369 140 58 198 567 details

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Last database updated September 8, 2011 PhenoM 1.0