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Detailed Information of the Allele
Allele Name cdc9-1
Gene Name CDC9
Orf YDL164C
Aliases MMS8
Type mutant
Description DNA ligase found in the nucleus and mitochondria, an essential enzyme that joins Okazaki fragments during DNA replication; also acts in nucleotide excision repair, base excision repair, and recombination
Links [Entrez-Gene]   [GeneDB]   [Germ Online]   [SGD]   [CYGD]   [BioGRID]
Download [Download All Data of the Allele cdc9-1]


Phenotypic images
Compartment [ Actin ] [DNA damage] [Nucleus] [Mitochondria] [Plasma membrane] [Mitotic Spindle]
Actin
temperature Site 1 Site 2 Site 3 Site 4
26
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32
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Statistic Matrix Information
Temperature 26 32
Bud Size
Cell Percentage 44.17% 5.34% 33.01% 17.48% 70.43% 3.11% 17.12% 9.34%
Cell Count 91 11 68 36 181 8 44 24
Actin Count 142 31 201 117 387 35 149 98


PhenoBlast Detail
The PhenoBlast search contains 865 features belong to cell shape and (or) subcellular compartment.
Total alleles in the database used for comparison = 773.
Detailed information in Help function.
WT : wild-type.
Nid: number of features both significantly increased in query and enlisted mutant.
Ndd : number of features both significantly decreased in query and enlisted mutant.
Nad : Nad = Nid + Ndd
Na : number of features both unchanged in query and enlisted mutant.
All : All = Nad + Na.

RN Allele(s) Na Nid Ndd Nad All Match Details
1 spc24 4-2 327 162 89 251 578 details
2 cdc2-2 312 179 72 251 563 details
3 ssc1-2 320 175 69 244 564 details
4 pgi1-2 380 161 80 241 621 details
5 mms21-1 351 181 60 241 592 details
6 pol1-1 348 180 61 241 589 details
7 pol1-ts 317 163 77 240 557 details
8 ndc1-4 380 166 73 239 619 details
9 ccl1-ts4 395 160 76 236 631 details
10 dbf2-3 362 159 73 232 594 details
11 cdc24-H 333 158 74 232 565 details
12 sec5-24 326 163 69 232 558 details
13 taf11-ts2 349 171 60 231 580 details
14 rfc2-1 319 162 66 228 547 details
15 LYS5 361 148 79 227 588 details
16 cdc35-1 357 152 75 227 584 details
17 sec15-1 305 160 67 227 532 details
18 mps1-1 334 158 68 226 560 details
19 cdc24-4 386 163 62 225 611 details
20 dpb11-1 370 148 77 225 595 details
21 sec10-2 265 166 59 225 490 details
22 cdc25-2 397 152 72 224 621 details
23 spt16-ts 340 146 78 224 564 details
24 rsp5-1 381 139 84 223 604 details
25 stt3-7 386 142 80 222 608 details
26 mcd1-73 368 150 72 222 590 details
27 cdc39-1 310 160 62 222 532 details
28 glc7-12 347 151 70 221 568 details
29 kin28-ts 339 159 60 219 558 details
30 prp43-ts2 373 153 65 218 591 details
31 cdc26-1 341 142 75 217 558 details
32 pik1-104 351 144 72 216 567 details
33 ssl1-T242I 346 150 66 216 562 details
34 pol12-ts 311 142 74 216 527 details
35 sec3-2 363 144 71 215 578 details
36 sec7-1 362 161 54 215 577 details
37 cdc36-16 326 151 64 215 541 details
38 TRP2 318 138 77 215 533 details
39 dna2-2 315 146 69 215 530 details
40 rho1-td 375 148 66 214 589 details
41 sfi1-7 368 146 68 214 582 details
42 sec8-6 257 134 80 214 471 details
43 spc24 10-1 376 140 73 213 589 details
44 ded1-199 373 159 54 213 586 details
45 scc4-4 358 147 66 213 571 details
46 ubc9-2 344 165 48 213 557 details
47 nmt1-181 374 149 63 212 586 details
48 abf1-102 353 131 81 212 565 details
49 rfc4-20 384 144 67 211 595 details
50 sec22-1 333 143 68 211 544 details

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Last database updated September 8, 2011 PhenoM 1.0