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Detailed Information of the Allele
Allele Name pcf11-ts2
Gene Name PCF11
Orf YDR228C
Aliases
Type mutant
Description mRNA 3' end processing factor, essential component of cleavage and polyadenylation factor IA (CF IA), involved in pre-mRNA 3' end processing and in transcription termination; binds C-terminal domain of largest subunit of RNA pol II (Rpo21p); required for gene looping
Links [Entrez-Gene]   [GeneDB]   [Germ Online]   [SGD]   [CYGD]   [BioGRID]
Download [Download All Data of the Allele pcf11-ts2]


Phenotypic images
Compartment [ Actin ] [DNA damage] [Nucleus] [Mitochondria] [Plasma membrane] [Mitotic Spindle]
Actin
temperature Site 1 Site 2 Site 3 Site 4
26
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32
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Statistic Matrix Information
Temperature 26 32
Bud Size
Cell Percentage 29.41% 3.31% 18.38% 48.9% 56.55% 6.37% 20.97% 16.1%
Cell Count 80 9 50 133 151 17 56 43
Actin Count 152 53 227 791 388 69 293 297


PhenoBlast Detail
The PhenoBlast search contains 865 features belong to cell shape and (or) subcellular compartment.
Total alleles in the database used for comparison = 773.
Detailed information in Help function.
WT : wild-type.
Nid: number of features both significantly increased in query and enlisted mutant.
Ndd : number of features both significantly decreased in query and enlisted mutant.
Nad : Nad = Nid + Ndd
Na : number of features both unchanged in query and enlisted mutant.
All : All = Nad + Na.

RN Allele(s) Na Nid Ndd Nad All Match Details
1 pcf11-2 448 167 64 231 679 details
2 pol1-1 420 171 49 220 640 details
3 pol1-ts 390 168 51 219 609 details
4 sec10-2 329 167 51 218 547 details
5 rat1-1 473 167 50 217 690 details
6 cdc2-2 369 162 55 217 586 details
7 ost1-6 394 151 63 214 608 details
8 prp4-ts 416 155 58 213 629 details
9 sec6-4 439 153 58 211 650 details
10 sec31-1 415 150 60 210 625 details
11 TRP2 391 132 78 210 601 details
12 nmd3-4 460 149 60 209 669 details
13 mms21-1 408 159 49 208 616 details
14 hys2-ts 415 154 53 207 622 details
15 rpt3-1 381 151 56 207 588 details
16 ret2-1 486 132 74 206 692 details
17 rho3-1 458 148 58 206 664 details
18 cdc21-ts 449 137 69 206 655 details
19 krr1-17 407 153 53 206 613 details
20 LYS5 405 152 54 206 611 details
21 rpo31-698 400 148 58 206 606 details
22 taf11-ts2 383 154 52 206 589 details
23 pcf11-1 477 144 61 205 682 details
24 arp9-1 434 141 64 205 639 details
25 sec8-6 292 138 67 205 497 details
26 cdc7-1 485 145 59 204 689 details
27 srm1-ts 368 147 57 204 572 details
28 sec15-1 361 153 51 204 565 details
29 cdc21-1 436 158 45 203 639 details
30 dbf2-3 427 143 60 203 630 details
31 gcd14-4 409 147 56 203 612 details
32 tys1-1 409 142 61 203 612 details
33 exo84-102 384 152 51 203 587 details
34 rfc2-1 382 150 53 203 585 details
35 ssc1-2 340 156 47 203 543 details
36 cdc24-4 455 144 58 202 657 details
37 arp7-E411K 437 152 50 202 639 details
38 nse4-ts1 400 152 50 202 602 details
39 pob3-7 476 154 47 201 677 details
40 tfb1-6 432 158 43 201 633 details
41 taf7-ts1 408 150 51 201 609 details
42 afg2-18 488 148 52 200 688 details
43 spt16-ts 388 142 58 200 588 details
44 spc24 4-2 370 137 63 200 570 details
45 sec22-1 393 138 61 199 592 details
46 dna2-2 371 145 54 199 570 details
47 sub2-1 448 143 55 198 646 details
48 sec11-2 434 139 59 198 632 details
49 nop4-3 410 136 62 198 608 details
50 vti1-11 406 142 56 198 604 details

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Last database updated September 8, 2011 PhenoM 1.0