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Detailed Information of the Allele
Allele Name prp16-ts
Gene Name PRP16
Orf YKR086W
Aliases PRP23 , RNA16
Type mutant
Description DEAH-box RNA helicase involved in second catalytic step of splicing; exhibits ATP-dependent RNA unwinding activity; mediates the release of Yju2p and Cwc25p in the second step; in the absence of ATP, stabilizes the binding of Cwc25p to the spliceosome in the first catalytic step
Links [Entrez-Gene]   [GeneDB]   [Germ Online]   [SGD]   [CYGD]   [BioGRID]
Download [Download All Data of the Allele prp16-ts]


Phenotypic images
Compartment [ Actin ] [DNA damage] [Nucleus] [Mitochondria] [Plasma membrane] [Mitotic Spindle]
Actin
temperature Site 1 Site 2 Site 3 Site 4
26
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32
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Statistic Matrix Information
Temperature 26 32
Bud Size
Cell Percentage 36.32% 4.25% 30.19% 29.25% 53.62% 7.25% 20.77% 18.36%
Cell Count 77 9 64 62 111 15 43 38
Actin Count 110 18 199 212 225 43 142 169


PhenoBlast Detail
The PhenoBlast search contains 865 features belong to cell shape and (or) subcellular compartment.
Total alleles in the database used for comparison = 773.
Detailed information in Help function.
WT : wild-type.
Nid: number of features both significantly increased in query and enlisted mutant.
Ndd : number of features both significantly decreased in query and enlisted mutant.
Nad : Nad = Nid + Ndd
Na : number of features both unchanged in query and enlisted mutant.
All : All = Nad + Na.

RN Allele(s) Na Nid Ndd Nad All Match Details
1 spt16-ts 373 170 72 242 615 details
2 gwt1-20 403 163 71 234 637 details
3 gcd14-4 369 159 75 234 603 details
4 pol1-ts 365 166 63 229 594 details
5 scc4-4 388 168 60 228 616 details
6 sec31-1 402 157 68 225 627 details
7 taf11-ts2 346 162 63 225 571 details
8 LYS5 365 159 65 224 589 details
9 sec8-6 269 140 84 224 493 details
10 rfc2-1 367 163 60 223 590 details
11 pol1-1 363 175 48 223 586 details
12 dna2-2 352 159 63 222 574 details
13 cdc1-4 388 145 75 220 608 details
14 ost1-6 358 155 65 220 578 details
15 sec10-2 316 147 73 220 536 details
16 ndc1-4 398 143 76 219 617 details
17 sec26-F856AW860A 385 149 69 218 603 details
18 nmt1-181 384 153 65 218 602 details
19 pcf11-2 388 150 67 217 605 details
20 cop1-1 409 127 89 216 625 details
21 vti1-2 386 140 76 216 602 details
22 cdc2-2 330 148 68 216 546 details
23 ssc1-2 303 157 59 216 519 details
24 dpb11-1 394 147 67 214 608 details
25 sec11-2 382 140 74 214 596 details
26 pti1-ts1 372 132 81 213 585 details
27 exo70-38 408 143 69 212 620 details
28 taf7-ts1 387 151 61 212 599 details
29 arp9-1 373 136 76 212 585 details
30 TRP2 329 124 88 212 541 details
31 mge1-100 409 134 77 211 620 details
32 tys1-1 377 134 77 211 588 details
33 tap42-11 402 134 76 210 612 details
34 rpb5-H147R 359 141 69 210 569 details
35 pre3-2 366 129 80 209 575 details
36 exo84-102 348 156 53 209 557 details
37 ctf8-9 423 145 63 208 631 details
38 nop2-6 423 117 91 208 631 details
39 emg1-1 402 141 67 208 610 details
40 cdc24-4 399 148 60 208 607 details
41 vti1-11 370 148 60 208 578 details
42 rpt3-1 349 137 71 208 557 details
43 nse3-ts3 419 152 55 207 626 details
44 sec6-4 372 140 67 207 579 details
45 cdc24-H 366 147 60 207 573 details
46 srm1-ts 323 147 60 207 530 details
47 stn1-13 395 137 69 206 601 details
48 gle1-4 387 147 59 206 593 details
49 nop4-3 380 126 80 206 586 details
50 qri1-ts6 375 131 75 206 581 details

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Last database updated September 8, 2011 PhenoM 1.0