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Detailed Information of the Allele
Allele Name rat1-1
Gene Name RAT1
Orf YOR048C
Aliases XRN2 , TAP1 , HKE1
Type mutant
Description Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination
Links [Entrez-Gene]   [GeneDB]   [Germ Online]   [SGD]   [CYGD]   [BioGRID]
Download [Download All Data of the Allele rat1-1]


Phenotypic images
Compartment [ Actin ] [DNA damage] [Nucleus] [Mitochondria] [Plasma membrane] [Mitotic Spindle]
Actin
temperature Site 1 Site 2 Site 3 Site 4
26
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32
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Statistic Matrix Information
Temperature 26 32
Bud Size
Cell Percentage 23.78% 1.4% 22.73% 52.1% 45.7% 3.64% 29.47% 21.19%
Cell Count 68 4 65 149 138 11 89 64
Actin Count 107 9 214 712 308 41 489 341


PhenoBlast Detail
The PhenoBlast search contains 865 features belong to cell shape and (or) subcellular compartment.
Total alleles in the database used for comparison = 773.
Detailed information in Help function.
WT : wild-type.
Nid: number of features both significantly increased in query and enlisted mutant.
Ndd : number of features both significantly decreased in query and enlisted mutant.
Nad : Nad = Nid + Ndd
Na : number of features both unchanged in query and enlisted mutant.
All : All = Nad + Na.

RN Allele(s) Na Nid Ndd Nad All Match Details
1 sec10-2 340 186 60 246 586 details
2 sec15-1 362 173 53 226 588 details
3 sub2-1 448 162 58 220 668 details
4 arp7-E411K 430 171 48 219 649 details
5 pcf11-ts2 473 167 50 217 690 details
6 rpo31-698 388 161 56 217 605 details
7 cdc2-2 341 167 50 217 558 details
8 pcf11-2 407 165 48 213 620 details
9 sec6-4 414 157 53 210 624 details
10 sec8-6 285 150 60 210 495 details
11 sec8-9 395 149 60 209 604 details
12 srm1-ts 357 153 56 209 566 details
13 exo70-29/37 486 154 53 207 693 details
14 rho3-1 432 153 54 207 639 details
15 gdi1-1 392 174 33 207 599 details
16 ole1-m2 332 164 43 207 539 details
17 cdc21-1 419 163 43 206 625 details
18 dbf2-3 405 161 45 206 611 details
19 gcd14-4 395 153 53 206 601 details
20 sec26-F856AW860A 389 157 49 206 595 details
21 prp4-ts 384 157 49 206 590 details
22 sec39-1 463 161 44 205 668 details
23 sln1-ts4 442 156 49 205 647 details
24 ydr196c-1 427 151 53 204 631 details
25 spn1-K192N 423 152 52 204 627 details
26 TRP2 366 142 62 204 570 details
27 pcf11-1 455 148 54 202 657 details
28 taf7-ts1 390 161 41 202 592 details
29 kin28-ts 388 164 38 202 590 details
30 sec5-24 344 155 47 202 546 details
31 exo70-38 416 149 52 201 617 details
32 ssu72-2 501 161 39 200 701 details
33 cdc21-ts 421 139 61 200 621 details
34 exo84-102 374 163 37 200 574 details
35 cus1-3 439 154 45 199 638 details
36 arp9-1 417 147 52 199 616 details
37 taf12-L464A 405 165 34 199 604 details
38 cdc13-1 390 152 47 199 589 details
39 pol1-ts 350 160 39 199 549 details
40 rpt3-1 350 148 51 199 549 details
41 nut2-ts 309 160 39 199 508 details
42 sgt1-3 459 155 43 198 657 details
43 ypt1-3 441 155 43 198 639 details
44 ala1-1 415 157 41 198 613 details
45 nup145-R4 415 149 49 198 613 details
46 gle1-2 457 160 37 197 654 details
47 mge1-100 438 149 48 197 635 details
48 enp1-1 436 148 49 197 633 details
49 hym1-15 411 144 53 197 608 details
50 afg2-18 463 152 44 196 659 details

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Last database updated September 8, 2011 PhenoM 1.0