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8. Download

In this section, we will show you the format of downloaded file. User can download three kind of files:
  • all temperature-sensitive alleles dataset
  • quantitative single-cell measurements of each allele
  • morphological images (TIFF format) of each allele

8.1. all temperature-sensitive alleles dataset

All temperature-sensitive alleles dataset, named all_tsAllele.gz , was compressed by gzip.

The file format is below:
alleleName : Allele Name 1
orfName : Open Reading Frame (ORF) Name 1
Key : Measurements (values are separated by comma)
Key : ......
......
alleleName : Allele Name 2
orfName : Open Reading Frame (ORF) Name 2
Key : Measurements (values are separated by comma)
Key : ......
................................................

The Key format is certain temperature plus certain bud size plus cell or compartments plus morphological feature, e.g. 26_unbud_cellular_area


8.2. quantitative single-cell measurements of each allele

The quantitative single-cell measurements of each allele was also compressed by gzip.

The file format is below:
orfName : Open Reading Frame (ORF) Name
Allele Name : Allele Name
cell or subcellular compartments dataset 1 :
quantitative measurements (values are separated by tab)
......
cell or subcellular compartments dataset 2 :
quantitative measurements (values are separated by tab)
......
................................................


8.3. morphological images (TIFF format) of each allele

The morphological tif image can be downloaded from the system and the average size is 2.5 Mb.

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Last database updated September 8, 2011 PhenoM 1.0